The detailed information of tRNA gene sequence


Sequence ID>W131206229
Genome IDATFN01000009
Search identical group
Phylum/ClassBacteroidota
SpeciesHoylesella oralis HGA0225 [ATFN]
Start position on genome 52559
End posion on genome 52485
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caagaaaaat
tRNA gene sequence 
GGCGGGATAGCTCAGCTGGTTAGAGCGTCGGATTCATAATCCGGAGGTCGTGGGTTCGGG
TCCCACCCCCGCTACtt
Downstream region at tRNA end position 
agtacagttt
Secondary structure (Cloverleaf model)
>W131206229	Met	CAT
                   t      ACtt agtacagttt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A   C          T G
                    T     C A C C C     G
      C G A        A      | | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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