The detailed information of tRNA gene sequence


Sequence ID>C001520
Genome IDCP000395
Search identical group
Phylum/ClassSpirochaetota
SpeciesBorreliella afzelii PKo [CP000395]
Start position on genome 448255
End posion on genome 448182
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
taagttgatt
tRNA gene sequence 
GGGGGTTTAGCTCAGTTGGCTAGAGCATCGGCTTTGCAAGCCGAGGGTCAAGGGTTCGAG
TCCCTTAACCTCCAtag
Downstream region at tRNA end position 
gcatgtgccc
Secondary structure (Cloverleaf model)
>C001520	Ala	TGC
                   t      Atag gcatgtgccc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     T - A          T G
                    T     T T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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