The detailed information of tRNA gene sequence


Sequence ID>W131249999
Genome IDCAUF01000141
Search identical group
Phylum/ClassActinomycetota
SpeciesTropheryma whipplei str. Art1 [CAUF]
Start position on genome 48427
End posion on genome 48354
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttcggttttt
tRNA gene sequence 
AGGGCGGTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGT
CCTGTCCGCCCTGCgt
Downstream region at tRNA end position 
gcaggttcaa
Secondary structure (Cloverleaf model)
>W131249999	Trp	CCA
                   t      GCgt gcaggttcaa
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G T C C     A
      T A A        G      + | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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