The detailed information of tRNA gene sequence


Sequence ID>W131218297
Genome IDATXO01000006
Search identical group
Phylum/ClassBacillota
SpeciesCaldicellulosiruptor acetigenus DSM 7040 [ATXO]
Start position on genome 128514
End posion on genome 128422
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaaaaaaggc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTCGAAGGCACACGACTCGAAATCGTGCGCACCCCCAAAAAGG
GTGCCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
ttttttattt
Secondary structure (Cloverleaf model)
>W131218297	Ser	CGA
                   c      GCCA ttttttattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CGCACCCCCAAAAAGGGTGCC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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