The detailed information of tRNA gene sequence


Sequence ID>W131176142
Genome IDARJU01000078
Search identical group
Phylum/ClassSpirochaetota
SpeciesSediminispirochaeta bajacaliforniensis DSM 16054 [ARJU]
Start position on genome 118568
End posion on genome 118495
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcctcacttc
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCATCTGACTCATAATCAGAGGGTCGCAGGTTCAAG
TCCTGCTGGGCCCAtaa
Downstream region at tRNA end position 
gtaaatgttg
Secondary structure (Cloverleaf model)
>W131176142	Met	CAT
                   c      Ataa gtaaatgttg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     C G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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