The detailed information of tRNA gene sequence


Sequence ID>W131098626
Genome IDAORY01000005
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingomonas sp. Mn802worker [AORY]
Start position on genome 229145
End posion on genome 229234
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgccgcatcc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAACGCTTTGCTAAAGCGTCGTACGGGAAACTGTA
CCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
ttccatagat
Secondary structure (Cloverleaf model)
>W131098626	Ser	GCT
                   c      GCCA ttccatagat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGAAACTGTACC
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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