The detailed information of tRNA gene sequence


Sequence ID>C002310
Genome IDCP000441
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBurkholderia ambifaria AMMD [CP000440,CP000441,CP000442]
Start position on genome 181325
End posion on genome 181416
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttctctcgtc
tRNA gene sequence 
GGAAGGCATTCGTATCCGGTGGTACGGCTGGACTTCAAATCCAGTTGGGGGTGTCAGACA
CTCCCGGGTCGGTTCGACTCCGGCTGCCTTCCgcca
Downstream region at tRNA end position 
tttggtttgc
Secondary structure (Cloverleaf model)
>C002310	SeC	TCA
                   c      gcca tttggtttgc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G G C C     A
      C C T        T      | + | | |     G
    G       A T G C       G T C G G     C
    G       | | | |                 T T
    T       T A C G
      G G          G     TTGGGGGTGTCAGACACTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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