The detailed information of tRNA gene sequence


Sequence ID>W131100721
Genome IDAOUY01000037
Search identical group
Phylum/ClassSpirochaetota
SpeciesLeptospira interrogans serovar Copenhageni str. Fiocruz LV4231 [AOUY]
Start position on genome 117668
End posion on genome 117579
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aacctgaact
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGTTTATGGTACATGCTTGGAAAGCATGCGTAGGGTAACACCTA
CCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
aacttccctc
Secondary structure (Cloverleaf model)
>W131100721	Ser	GGA
                   t      GCCA aacttccctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G       + | |                   T T
    T       T G G T
      T T A        A     CGTAGGGTAACACCTACC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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