The detailed information of tRNA gene sequence


Sequence ID>W131179599
Genome IDARMN01000018
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAmphritea japonica ATCC BAA-1530 [ARMN]
Start position on genome 18872
End posion on genome 18796
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taagtgctat
tRNA gene sequence 
GGCAATATAGCTCAGCTGGTTAGAGCATCGCATTCATAATGCGAGGGTCGCAGGTTCGAG
TCCCGCTATTGCCACCA
Downstream region at tRNA end position 
ttcttttgct
Secondary structure (Cloverleaf model)
>W131179599	Met	CAT
                   t      ACCA ttcttttgct
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     T - A
                     A - T          T G
                    T     C G C C C     A
      C G A        A      | |   | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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