The detailed information of tRNA gene sequence


Sequence ID>W131215587
Genome IDATVD01000001
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesArenimonas oryziterrae DSM 21050 [ATVD]
Start position on genome 316588
End posion on genome 316512
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaagaaacgc
tRNA gene sequence 
GGAGTGGTAGTTCAGTCGGTTAGAATGCTGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
tacccccgag
Secondary structure (Cloverleaf model)
>W131215587	Asp	GTC
                   c      GCCA tacccccgag
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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