The detailed information of tRNA gene sequence


Sequence ID>W131205845
Genome IDATFD01000006
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema socranskii subsp. paredis ATCC 35535 [ATFD]
Start position on genome 49223
End posion on genome 49311
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaatatttta
tRNA gene sequence 
GGAAAGATGTCCGAGTGGTTTAAGGTACACGCTTGGAAGGCGTGCGTGCCCAAAAGGCAC
CGGGGGTTCGAATCCCCCTCTTTCCGCTA
Downstream region at tRNA end position 
tgcccaggtg
Secondary structure (Cloverleaf model)
>W131205845	Ser	GGA
                   a      GCTA tgcccaggtg
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | |                   T T
    T       A G G T
      T T A        A     CGTGCCCAAAAGGCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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