The detailed information of tRNA gene sequence


Sequence ID>W131221828
Genome IDAUAU01000011
Search identical group
Phylum/ClassAcidobacteriota
SpeciesGeothrix fermentans DSM 14018 [AUAU]
Start position on genome 24195
End posion on genome 24287
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggaaggcctt
tRNA gene sequence 
GGAGAGATGCCGGAGTGGCCGATCGGGCTCGCCTGCTAAGCGAGTGTATTGGGTAAACCA
GTACCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
ctgaagccgc
Secondary structure (Cloverleaf model)
>W131221828	Ser	GCT
                   t      GCCA ctgaagccgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G G G G G     C
    G       + | | |                 T T
    C       T C G G
      C G A        G     TGTATTGGGTAAACCAGTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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