The detailed information of tRNA gene sequence


Sequence ID>W131182950
Genome IDARRF01000088
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesOceanospirillales bacterium SCGC AAA298-N10 [ARRF]
Start position on genome 2147
End posion on genome 2056
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctttattata
tRNA gene sequence 
GGAGGGATGGCAGAGTCTGGTTTATTGTAGCGGTCTTGAAAACCGTCGTGCCTTCATCGG
CACCGTGGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
ctaaattaaa
Secondary structure (Cloverleaf model)
>W131182950	Ser	TGA
                   a      GCCA ctaaattaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  T         G A C G       G T G G G     C
  G         + | | +                 T T
  G         T T G T
    T T T A        A     CGTGCCTTCATCGGCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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