The detailed information of tRNA gene sequence


Sequence ID>W131237452
Genome IDAUOM01000069
Search identical group
Phylum/ClassAlphaproteobacteria
Speciesalpha proteobacterium JGI 0001002-C12 [AUOM]
Start position on genome 1015
End posion on genome 939
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnnntttct
tRNA gene sequence 
GGGGCTGTAGCTCAGCTGGTTAGAGCACCGTGTTGATAACGCGGGGGTCGTTGGTTCGAG
TCCAACCAGCCCTACCA
Downstream region at tRNA end position 
gttactgttc
Secondary structure (Cloverleaf model)
>W131237452	Ile	GAT
                   t      ACCA gttactgttc
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     C A A C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    G - C
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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