The detailed information of tRNA gene sequence


Sequence ID>C003871
Genome IDCP000125
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBurkholderia pseudomallei 1710b [CP000124, CP000125]
Start position on genome 1089269
End posion on genome 1089194
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcgttttta
tRNA gene sequence 
GGGCCTGTAGCTCAGGGGTTAGAGCAGTCGACTCATAATCGATTGGTCGCGGGTTCGAAA
CCCGCCGGGCCCACCA
Downstream region at tRNA end position 
tatttttcta
Secondary structure (Cloverleaf model)
>C003871	Met	CAT
                   a      ACCA tatttttcta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          A A
                    T     C G C C C     A
      G G A        A      | | | | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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