The detailed information of tRNA gene sequence


Sequence ID>C005251
Genome IDAE015925
Search identical group
Phylum/ClassChlamydiota
SpeciesChlamydia caviae GPIC [AE015925]
Start position on genome 214462
End posion on genome 214551
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttggctagt
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCTTAAGGAGCACGCTTGGAAAGCGTGTGTGCGTTAACGCGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGTCA
Downstream region at tRNA end position 
actttctaaa
Secondary structure (Cloverleaf model)
>C005251	Ser	GGA
                   t      GTCA actttctaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TGTGCGTTAACGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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