The detailed information of tRNA gene sequence


Sequence ID>C005266
Genome IDAE015925
Search identical group
Phylum/ClassChlamydiota
SpeciesChlamydia caviae GPIC [AE015925]
Start position on genome 806398
End posion on genome 806326
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcatgctttt
tRNA gene sequence 
GGGTGTGTAGCTTAGCTGGTAGAGCAGTGGCCTCCAAAGCCGCCGGTCAGGGGTTCGACT
CCCTTCGCACCCGtat
Downstream region at tRNA end position 
agacttaatt
Secondary structure (Cloverleaf model)
>C005266	Trp	CCA
                   t      Gtat agacttaatt
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     T + G
                     G - C          T C
                    T     T T C C C     A
      C G A        A      | + | | |     G
    T       T T C G       A G G G G     C
    G       + | | |                 T T
    G       G A G C
      T A          A     CGGTC
                    G - C
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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