The detailed information of tRNA gene sequence


Sequence ID>C005268
Genome IDAE015925
Search identical group
Phylum/ClassChlamydiota
SpeciesChlamydia caviae GPIC [AE015925]
Start position on genome 694721
End posion on genome 694648
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catctagtgt
tRNA gene sequence 
GGCGGTATAGCTCAGATGGTTAGAGCAGCAGAATCATAATCTGCGAGTCGTTGGTTCAAG
TCCGACTACCGCTAttt
Downstream region at tRNA end position 
tcttctataa
Secondary structure (Cloverleaf model)
>C005268	Met	CAT
                   t      Attt tcttctataa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     C A G C C     A
      A G A        A      | | + | |     A
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GAGTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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