The detailed information of tRNA gene sequence


Sequence ID>C005275
Genome IDAE015925
Search identical group
Phylum/ClassChlamydiota
SpeciesChlamydia caviae GPIC [AE015925]
Start position on genome 350084
End posion on genome 349998
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atgtattcgc
tRNA gene sequence 
GGAAGAGTGGCAGAGTGGTCGAATGCATCTGATTCGAAATCAGAAGTTCTCTTACAGGAA
CCGGGGGTTCGAATCCCTTCTCTTCCGttt
Downstream region at tRNA end position 
tctatttcct
Secondary structure (Cloverleaf model)
>C005275	Ser	CGA
                   c      Gttt tctatttcct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     AGTTCTCTTACAGGAACC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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