The detailed information of tRNA gene sequence


Sequence ID>C006130
Genome IDCP000488
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesCandidatus Ruthia magnifica str. Cm [Calyptogena magnifica] [CP000488]
Start position on genome 177792
End posion on genome 177719
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gttttaacat
tRNA gene sequence 
GGCTGGGTAGCAAAGCGGTTATGCAGGGGCCTGCAAAGCCTTATAGACCGGTTCGATTCC
GGTCCCAGCCTCCA
Downstream region at tRNA end position 
actttatatt
Secondary structure (Cloverleaf model)
>C006130	Cys	GCA
                   t      TCCA actttatatt
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C          T T
                    T     T G G C C     A
        G A        A      | | | | |     G
      C     A A C G       A C C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     ATAG
                    G + T
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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