The detailed information of tRNA gene sequence


Sequence ID>C007380
Genome IDCP000239
Search identical group
Phylum/ClassCyanobacteriota
SpeciesSynechococcus sp. JA-3-3Ab [CP000239]
Start position on genome 1890240
End posion on genome 1890313
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgcagctcct
tRNA gene sequence 
GGGGCTGTAGTTCAATTGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGAG
CCCCGTCAGCCCCGtac
Downstream region at tRNA end position 
ctgttaggaa
Secondary structure (Cloverleaf model)
>C007380	Asp	GTC
                   t      Gtac ctgttaggaa
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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