The detailed information of tRNA gene sequence


Sequence ID>C007405
Genome IDCP000239
Search identical group
Phylum/ClassCyanobacteriota
SpeciesSynechococcus sp. JA-3-3Ab [CP000239]
Start position on genome 1210602
End posion on genome 1210512
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgccgctct
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGCTTCCTGCTAAGAAGTTACGGGGCCCAAAAGC
TCCGTCGAGGGTTCGAATCCCTCCCTCTCCGttg
Downstream region at tRNA end position 
ttgtggccag
Secondary structure (Cloverleaf model)
>C007405	Ser	GCT
                   t      Gttg ttgtggccag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TACGGGGCCCAAAAGCTCCGTC
                    G + T
                    C - G
                    T - A
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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