The detailed information of tRNA gene sequence


Sequence ID>C007409
Genome IDCP000239
Search identical group
Phylum/ClassCyanobacteriota
SpeciesSynechococcus sp. JA-3-3Ab [CP000239]
Start position on genome 994075
End posion on genome 994002
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agaaaagcgc
tRNA gene sequence 
CGCGGGGTAGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCACTGGTTCAAA
TCCAGTCCCCGCTAtag
Downstream region at tRNA end position 
gaactcaaca
Secondary structure (Cloverleaf model)
>C007409	Met	CAT
                   c      Atag gaactcaaca
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G A C C     A
      C G A        A      | | | | |     A
    C       C G A G       A C T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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