The detailed information of tRNA gene sequence


Sequence ID>C007417
Genome IDCP000240
Search identical group
Phylum/ClassCyanobacteriota
SpeciesSynechococcus sp. JA-2-3B'a[2-13] [CP000240]
Start position on genome 672186
End posion on genome 672258
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aaagtaaatc
tRNA gene sequence 
GGGGCTTTAGCTCAGTTGGTAGAGCACTTCAATGGCATTGAAGGGGTCAGCGGTTCAAGT
CCGCTAAGCTCCAttg
Downstream region at tRNA end position 
attgtgagtt
Secondary structure (Cloverleaf model)
>C007417	Ala	GGC
                   c      Attg attgtgagtt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     T - A          T G
                    T     T C G C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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