The detailed information of tRNA gene sequence


Sequence ID>C007455
Genome IDCP000240
Search identical group
Phylum/ClassCyanobacteriota
SpeciesSynechococcus sp. JA-2-3B'a[2-13] [CP000240]
Start position on genome 345549
End posion on genome 345476
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agaaaagcgc
tRNA gene sequence 
CGCGGGGTAGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCACTGGTTCAAA
TCCAGTCCCCGCTAtgc
Downstream region at tRNA end position 
ctgagagacg
Secondary structure (Cloverleaf model)
>C007455	Met	CAT
                   c      Atgc ctgagagacg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G A C C     A
      C G A        A      | | | | |     A
    C       C G A G       A C T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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