The detailed information of tRNA gene sequence


Sequence ID>C009288
Genome IDCR767821
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesEhrlichia ruminantium str. Welgevonden [CR767821]
Start position on genome 1443332
End posion on genome 1443421
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgttgtattt
tRNA gene sequence 
GGAAAGGTGGCTGAGTGGTCTAAAGCGCACGCCTGGAAAGTGTGTATACAGTGTCCTGTA
TCGAGGGTTCGAATCCCTCTCTTTCCGCCA
Downstream region at tRNA end position 
cctgttttta
Secondary structure (Cloverleaf model)
>C009288	Ser	GGA
                   t      GCCA cctgttttta
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C T A        G     TATACAGTGTCCTGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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