The detailed information of tRNA gene sequence


Sequence ID>C010518
Genome IDCP000544
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHalorhodospira halophila SL1 [CP000544]
Start position on genome 1242463
End posion on genome 1242538
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
cgcagccgtt
tRNA gene sequence 
GGCCGGGTAGCTCAGTCGGTAGAGCATGGGATTGAAAATCTCAGTGTCGGCGGTTCGATT
CCGTCCCCGGCCACCA
Downstream region at tRNA end position 
tctccttccc
Secondary structure (Cloverleaf model)
>C010518	Phe	GAA
                   t      ACCA tctccttccc
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T T
                    T     C T G C C     A
      T G A        A      | + | | |     G
    C       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    T - A
                    G - C
                    G + T
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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