The detailed information of tRNA gene sequence


Sequence ID>C010842
Genome IDCP000158
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHyphomonas neptunium ATCC 15444 [CP000158]
Start position on genome 2711925
End posion on genome 2711836
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
accccggcgc
tRNA gene sequence 
GGAGAGGTGGCGGAGTGGTCGATCGCGTCGGTCTCGAAAACCGATATACTCGCAAGGGTA
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gatattttcg
Secondary structure (Cloverleaf model)
>C010842	Ser	CGA
                   c      GCCA gatattttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C G       G A G G G     C
    G       + | | |                 T T
    T       T C G C
      C G A        G     TATACTCGCAAGGGTATC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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