The detailed information of tRNA gene sequence


Sequence ID>C010843
Genome IDCP000158
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHyphomonas neptunium ATCC 15444 [CP000158]
Start position on genome 2342020
End posion on genome 2341931
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tccgagcgct
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCGCCCCTGCTAAGGGCGTATACGTTAACGCGTA
TCGAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
gacttcctcc
Secondary structure (Cloverleaf model)
>C010843	Ser	GCT
                   t      GCCA gacttcctcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGTTAACGCGTATC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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