The detailed information of tRNA gene sequence


Sequence ID>C010958
Genome IDCP000436
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHistophilus somni [CP000436]
Start position on genome 1397
End posion on genome 1472
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
accattctac
tRNA gene sequence 
TCCTCCTTAGTTCAGTCGGTAGAACGGTGGACTGTTAATCCATATGTCGCTGGTTCAAGT
CCAGCAGGAGGAGCCA
Downstream region at tRNA end position 
actctatgtt
Secondary structure (Cloverleaf model)
>C010958	Asn	GTT
                   c      GCCA actctatgtt
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A          T G
                    T     C G A C C     A
      T G A        A      | | | | |     A
    C       C T T G       G C T G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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