The detailed information of tRNA gene sequence


Sequence ID>C010966
Genome IDCP000436
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHistophilus somni [CP000436]
Start position on genome 561972
End posion on genome 562058
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aaagcacaca
tRNA gene sequence 
GCCAGTGTGACGAAATTGGTAGACGTAGCGGATTCAAAATCCGCCGCCCTTAAAAGCGTG
TCGGTTCGAGTCCGACCACTGGCACCA
Downstream region at tRNA end position 
acttcaattt
Secondary structure (Cloverleaf model)
>C010966	Leu	CAA
                   a      ACCA acttcaattt
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C A G C C     A
      T A A        G      | | | | |     G
    T       A G C A       G T C G G     C
    G         | | |                 T T
    G       A C G T
      T A G        A     CGCCCTTAAAAGCGT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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