The detailed information of tRNA gene sequence


Sequence ID>C011002
Genome IDCP000436
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHistophilus somni [CP000436]
Start position on genome 486307
End posion on genome 486232
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttcgatttac
tRNA gene sequence 
GGGGATATAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCGTCGGTTCGATC
CCGATTATCTCCACCA
Downstream region at tRNA end position 
aattttctag
Secondary structure (Cloverleaf model)
>C011002	Ala	GGC
                   c      ACCA aattttctag
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          C T
                    T     T A G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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