The detailed information of tRNA gene sequence


Sequence ID>C011006
Genome IDCP000436
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHistophilus somni [CP000436]
Start position on genome 177132
End posion on genome 177057
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cgctccaggc
tRNA gene sequence 
GCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGAGGTCGGCGGTTCAAAT
CCGCCTATCAGCACCA
Downstream region at tRNA end position 
cttcttgttt
Secondary structure (Cloverleaf model)
>C011006	Thr	GGT
                   c      ACCA cttcttgttt
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     C C G C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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