The detailed information of tRNA gene sequence


Sequence ID>C011063
Genome IDCP000264
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesJannaschia sp. CCS1 [CP000264]
Start position on genome 546394
End posion on genome 546469
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gctctggtct
tRNA gene sequence 
AGGGGCGTAGCTCAGTTGGTAGAGCACCGGATTCCAAATCCGACGGTCGGGAGTTCGAGT
CTCTCCGCCCCTGCCA
Downstream region at tRNA end position 
gaccaccctc
Secondary structure (Cloverleaf model)
>C011063	Trp	CCA
                   t      GCCA gaccaccctc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTC
                    C   A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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