The detailed information of tRNA gene sequence


Sequence ID>C011077
Genome IDCP000264
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesJannaschia sp. CCS1 [CP000264]
Start position on genome 3578447
End posion on genome 3578536
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acgggtcagc
tRNA gene sequence 
GGAGACGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTAGGCGGGAAACTGTC
TCGAGGGTTCGAATCCCTTCGTCTCCGCCA
Downstream region at tRNA end position 
tttaccccaa
Secondary structure (Cloverleaf model)
>C011077	Ser	GCT
                   c      GCCA tttaccccaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAAACTGTCTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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