The detailed information of tRNA gene sequence


Sequence ID>C011829
Genome IDAM180252
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesLawsonia intracellularis PHE/MN1-00 [AM180252]
Start position on genome 1163686
End posion on genome 1163610
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttagtttgc
tRNA gene sequence 
AGGGCAGTAGCTCTAACGGCTAGAGCGCCGGTCTCCAAAACCGGATGTTGTGGGTTCGAA
TCCCTCCTGCCCTGCCA
Downstream region at tRNA end position 
tttggttttt
Secondary structure (Cloverleaf model)
>C011829	Trp	CCA
                   c      GCCA tttggttttt
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      |   | | |     G
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     ATGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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