The detailed information of tRNA gene sequence


Sequence ID>C011844
Genome IDAM180252
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesLawsonia intracellularis PHE/MN1-00 [AM180252]
Start position on genome 138634
End posion on genome 138558
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aaaaatcgtt
tRNA gene sequence 
GCGTCCGTAGCTCAGTAGGATAGAGCAGGAGCCTTCTAAGCTCTTGGCCGGGGGTTCGAT
TCCTCCCGGGCGCACCA
Downstream region at tRNA end position 
cttatttacc
Secondary structure (Cloverleaf model)
>C011844	Arg	TCT
                   t      ACCA cttatttacc
                     G - C
                     C - G
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T T
                    T     C C T C C     A
      T G A        A      | | + | |     G
    A       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     TGGCC
                    G + T
                    G - C
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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