The detailed information of tRNA gene sequence


Sequence ID>C013108
Genome IDAE016958
Search identical group
Phylum/ClassActinomycetota
SpeciesMycobacterium avium subsp. paratuberculosis K-10 [AE016958]
Start position on genome 11083
End posion on genome 11158
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tcacggtagc
tRNA gene sequence 
GGGGCCTTAGCTCAGTTGGTAGAGCACCGCCTTTGCAAGGCGGGTGTCAGGGGTTCGATT
CCCCTAGGCTCCACAA
Downstream region at tRNA end position 
atcgaatccc
Secondary structure (Cloverleaf model)
>C013108	Ala	TGC
                   c      ACAA atcgaatccc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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