The detailed information of tRNA gene sequence


Sequence ID>C013136
Genome IDAE016958
Search identical group
Phylum/ClassActinomycetota
SpeciesMycobacterium avium subsp. paratuberculosis K-10 [AE016958]
Start position on genome 3654694
End posion on genome 3654618
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cattcaccaa
tRNA gene sequence 
CGCGGGGTGGAGCAGCTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGCAGGTTCGAA
TCCTGTCCCCGCTACCA
Downstream region at tRNA end position 
ggtgaaacgg
Secondary structure (Cloverleaf model)
>C013136	Met	CAT
                   a      ACCA ggtgaaacgg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     G
    T       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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