The detailed information of tRNA gene sequence


Sequence ID>C015275
Genome IDBA000019
Search identical group
Phylum/ClassCyanobacteriota
SpeciesNostoc sp. PCC 7120 = FACHB-418 [BA000019]
Start position on genome 2199183
End posion on genome 2199274
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttgtcacctt
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGCAGATTGCTAATCTGTTGTACGGCAGGCAACT
CCGTACCGAGGGTTCGAATCCCTCCCTCTCCGttt
Downstream region at tRNA end position 
ttattgcttg
Secondary structure (Cloverleaf model)
>C015275	Ser	GCT
                   t      Gttt ttattgcttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTACGGCAGGCAACTCCGTACC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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