The detailed information of tRNA gene sequence


Sequence ID>C015506
Genome IDAM494475
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi str. Boryong [AM494475]
Start position on genome 1383217
End posion on genome 1383291
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttatttataa
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTTAGGACATCACCCTTTCACGGTGGAAACACGGGTTCGATTC
CCGTAGGGGTCACCA
Downstream region at tRNA end position 
cttaggcttt
Secondary structure (Cloverleaf model)
>C015506	Glu	TTC
                   a      ACCA cttaggcttt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAC
                    T + G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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