The detailed information of tRNA gene sequence


Sequence ID>C015514
Genome IDAM494475
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi str. Boryong [AM494475]
Start position on genome 1377182
End posion on genome 1377106
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gatattaata
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGCATTACGTTGACGTCGTAAGGGTCAGTGGTTCGAA
TCCTCTATCGCCCACCA
Downstream region at tRNA end position 
accaaaaagc
Secondary structure (Cloverleaf model)
>C015514	Val	GAC
                   a      ACCA accaaaaagc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T C T C C     A
      T G A        A      | |   | |     G
    T       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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