The detailed information of tRNA gene sequence


Sequence ID>C015917
Genome IDCP000142
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesSyntrophotalea carbinolica DSM 2380 [CP000142]
Start position on genome 981495
End posion on genome 981588
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgtgatgcat
tRNA gene sequence 
GGAAGCGCGTCGGTCGCTGGTGGGCCGCCCGGTCTTCAAAACCGGTGTGGGGGGTGAGAA
ACTTCCCAGGTGGGTTCGATTCCCATGCGCTTCCgcca
Downstream region at tRNA end position 
attctaaacc
Secondary structure (Cloverleaf model)
>C015917	SeC	TCA
                   t      gcca attctaaacc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G          T T
                    G     T A C C C     A
      C G C        T      + | | | |     G
    T       T G G C       G T G G G     C
    G       + | | |                 T T
    G       G C C G
      T G G        C     TGTGGGGGGTGAGAAACTTCCCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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