The detailed information of tRNA gene sequence


Sequence ID>C016840
Genome IDAE017126
Search identical group
Phylum/ClassCyanobacteriota
SpeciesProchlorococcus marinus subsp. marinus str. CCMP1375 CCMP1375; SS120 [AE017126]
Start position on genome 736184
End posion on genome 736098
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatcgaaagt
tRNA gene sequence 
GGAGAGTTGGTCGAGTGGTTTATGGCTCTAGTCTTGAAAACTAGCAAGGGTGCAAGTCCT
TCGGGGGTTCGAATCCCCCACTCTCCGttc
Downstream region at tRNA end position 
tataggaggg
Secondary structure (Cloverleaf model)
>C016840	Ser	TGA
                   t      Gttc tataggaggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G G G G G     C
    G       + | + |                 T T
    T       T G G C
      T T A        T     CAAGGGTGCAAGTCCTTC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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