The detailed information of tRNA gene sequence


Sequence ID>C016878
Genome IDBX548174
Search identical group
Phylum/ClassCyanobacteriota
SpeciesProchlorococcus marinus subsp. pastoris str. CCMP1986 MED4 [BX548174]
Start position on genome 625846
End posion on genome 625757
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttttcacct
tRNA gene sequence 
GGAGAGGTGGTCGAGTGGTTTAAGGCTCTAGTCTTGAAAACTAGCGTACCGGCAACGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
taattaatag
Secondary structure (Cloverleaf model)
>C016878	Ser	TGA
                   t      GCCA taattaatag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G G G     C
    G         | + |                 T T
    T       A G G C
      T T A        T     CGTACCGGCAACGGTACC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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