The detailed information of tRNA gene sequence


Sequence ID>C017221
Genome IDCP000680
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas mendocina [CP000680]
Start position on genome 711604
End posion on genome 711518
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
cgttttcagt
tRNA gene sequence 
GCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGGTGGCAACACCGTG
GAAGTTCGAGTCTTCTCCTGGGCACCA
Downstream region at tRNA end position 
aatttcgtga
Secondary structure (Cloverleaf model)
>C017221	Leu	CAG
                   t      ACCA aatttcgtga
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T G
                    T     T C T T C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGTGGCAACACCGT
                    C - G
                    T - A
                    G - C
                    G + T
                    T - A
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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