The detailed information of tRNA gene sequence


Sequence ID>C017934
Genome IDBX908798
Search identical group
Phylum/ClassChlamydiota
SpeciesCandidatus Protochlamydia amoebophila UWE25 [BX908798]
Start position on genome 128380
End posion on genome 128452
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cttttctttt
tRNA gene sequence 
GGGGCGTTAGCTCAGTTGGTAGAGCGCAACAATGGCATTGTTGAGGTCAACGGTTCGACT
CCGTTACGCTCCAact
Downstream region at tRNA end position 
tcttgttttc
Secondary structure (Cloverleaf model)
>C017934	Ala	GGC
                   t      Aact tcttgttttc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     T T G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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