The detailed information of tRNA gene sequence


Sequence ID>C017940
Genome IDBX908798
Search identical group
Phylum/ClassChlamydiota
SpeciesCandidatus Protochlamydia amoebophila UWE25 [BX908798]
Start position on genome 641151
End posion on genome 641223
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctctttactt
tRNA gene sequence 
GGGGCAATAGCTCAGTGGTTAGAGCAGCGGACTCATAACCCGCTGGTCGTAGGTTCAAAT
CCTACTTGCCCCActt
Downstream region at tRNA end position 
tttctaccta
Secondary structure (Cloverleaf model)
>C017940	Met	CAT
                   t      Actt tttctaccta
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T          T A
                    T     C A T C C     A
      T G A        A      | | | | |     A
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A   C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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