The detailed information of tRNA gene sequence


Sequence ID>C017946
Genome IDBX908798
Search identical group
Phylum/ClassChlamydiota
SpeciesCandidatus Protochlamydia amoebophila UWE25 [BX908798]
Start position on genome 1013785
End posion on genome 1013857
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttctttac
tRNA gene sequence 
GGCGGTATAGCTCAGTTGGTAGAGCAACGGAATCATAATCCGTGTGTCGTCGGTTCAAGT
CCGGCTGCCGCTAcat
Downstream region at tRNA end position 
cagttctctt
Secondary structure (Cloverleaf model)
>C017946	Met	CAT
                   c      Acat cagttctctt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     C G G C C     A
      T G A        A      | + | | |     A
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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