The detailed information of tRNA gene sequence


Sequence ID>C018090
Genome IDAE016853
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas syringae pv. tomato str. DC3000 [AE016853]
Start position on genome 2266753
End posion on genome 2266664
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtcgagatac
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGCTTAAGGAGCACGCCTGGAAAGTGTGTATACAAGAAATTGTA
TCGAGGGTTCGAATCCCTCCTTCACCGCCA
Downstream region at tRNA end position 
tattgaatta
Secondary structure (Cloverleaf model)
>C018090	Ser	GGA
                   c      GCCA tattgaatta
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TATACAAGAAATTGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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